ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o3wB2 - ECOD Domain | ECOD

ECOD/Domains/e5o3wB2

e5o3wB2

UID: 002158193

PDB

Range: B:6-438
PDB: 5O3W chain B(all domains)
UniProt: R4P353 (all domains)
Gene: Pcy1

Molecule: Peptide cyclase 1

3D Structure

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Related Domains

Browse other domains in Peptidase_S9_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyPeptidase_S9_N(5.1.4.14)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF02897Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5O3W RCSB PDB: 5O3W PDBe: 5O3W UniProt: R4P353

Downloads

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Drug annotations from DrugDomain.