ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yb8C1 - ECOD Domain | ECOD

ECOD/Domains/e5yb8C1

e5yb8C1

UID: 002158415

PDB

Range: C:12-358,C:476-560
PDB: 5YB8 chain C(all domains)
UniProt: W6JQJ6 (all domains)
Gene: laao

Molecule: L-amino acid oxidase/monooxygenase

3D Structure

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Related Domains

Browse other domains in Flavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFlavin containing amine oxidoreductase / NAD(P)-binding Rossmann-like domain(2003.1.2.18)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Shown in the structure viewer.

Pfam Families

PF01593Amino_oxidase

Flavin containing amine oxidoreductase

ClanCL0063NADP_Rossmann

PF13450NAD_binding_8

NAD(P)-binding Rossmann-like domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5YB8 RCSB PDB: 5YB8 PDBe: 5YB8 UniProt: W6JQJ6

Downloads

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Drug annotations from DrugDomain.