ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5yfvB1 - ECOD Domain | ECOD

ECOD/Domains/e5yfvB1

e5yfvB1

UID: 002161389

PDB

Range: B:3-112
PDB: 5YFV chain B(all domains)
UniProt: O57947 (all domains)
Gene: PH0208

Molecule: Ribose-1,5-bisphosphate isomerase

3D Structure

Loading viewer...

Related Domains

Browse other domains in IF-2B →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTranslation initiation factor eIF-2B delta subunit N-terminal helical domain(3651)

HH-groupTranslation initiation factor eIF-2B delta subunit N-terminal helical domain(3651.1)

TT-groupTranslation initiation factor eIF-2B delta subunit N-terminal helical domain(3651.1.1)

FFamilyIF-2B(3651.1.1.1)

Ligands

in contact, ≤ 4 Å

1,5-di-O-phosphono-alpha-D-ribofuranoseRI2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Initiation factor 2 subunit family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5YFV RCSB PDB: 5YFV PDBe: 5YFV UniProt: O57947

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure