ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ffaA1 - ECOD Domain | ECOD

ECOD/Domains/e6ffaA1

e6ffaA1

UID: 002162073

PDB

Range: A:29-184
PDB: 6FFA chain A(all domains)
UniProt: P03305 (all domains)

Molecule: Lbpro

3D Structure

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Related Domains

Browse other domains in Peptidase_C28 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C28(219.1.1.30)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05408Peptidase_C28

Foot-and-mouth virus L-proteinase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6FFA RCSB PDB: 6FFA PDBe: 6FFA UniProt: P03305

Downloads

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