ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m9bA1 - ECOD Domain | ECOD

ECOD/Domains/e5m9bA1

e5m9bA1

UID: 002162200

PDB

Range: A:152-721
PDB: 5M9B chain A(all domains)
UniProt: Q05098 (all domains)
Gene: pfeA

Molecule: Ferric enterobactin receptor

3D Structure

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Related Domains

Browse other domains in TonB_dep_Rec_b-barrel →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupLigand-gated protein channel(5084.5.3)

FFamilyTonB_dep_Rec_b-barrel(5084.5.3.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetic acid, 1,2-ETHANEDIOL)

Acetic acidACY
DrugBank DB03166
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00593TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

ClanCL0193MBB

External Links

ECOD PDB View: 5M9B RCSB PDB: 5M9B PDBe: 5M9B UniProt: Q05098

Downloads

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