ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mdkL1 - ECOD Domain | ECOD

ECOD/Domains/e5mdkL1

e5mdkL1

UID: 002162208

PDB

Range: L:337-407
PDB: 5MDK chain L(all domains)
UniProt: P31891 (all domains)
Gene: hoxG

Molecule: Uptake hydrogenase large subunit; HOXG

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases →

Classification

AArchitecturebeta meanders(a.2)

XX-groupall-beta domain in nickel-iron hydrogenase large subunit(4046)

HH-groupall-beta domain in nickel-iron hydrogenase large subunit(4046.1)

TT-groupall-beta domain in nickel-iron hydrogenase large subunit(4046.1.1)

FFamilyNiFeSe_Hases(4046.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

External Links

ECOD PDB View: 5MDK RCSB PDB: 5MDK PDBe: 5MDK UniProt: P31891

Downloads

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