ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5oxkA2 - ECOD Domain | ECOD

ECOD/Domains/e5oxkA2

e5oxkA2

UID: 002162313

PDB

Range: A:210-472
PDB: 5OXK chain A(all domains)
UniProt: Q5M4H8 (all domains)
Gene: dtpT

Molecule: Di-or tripeptide:H+ symporter

3D Structure

Loading viewer...

Related Domains

Browse other domains in PTR2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupMajor facilitator superfamily (MFS) general substrate transporter(5050)

HH-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1)

TT-groupMajor facilitator superfamily (MFS) general substrate transporter(5050.1.1)

FFamilyPTR2(5050.1.1.2)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160within 5 Å only
L-GlutamineGLN
drugDrugBank DB00130within 5 Å only

Pfam Families

POT family

ClanCL0015MFS

External Links

ECOD PDB View: 5OXK RCSB PDB: 5OXK PDBe: 5OXK UniProt: Q5M4H8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE78M

(2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE78N

+ 2 additives (Phosphate ion, Pentaethylene glycol)

Phosphate ionPO4
DrugBank DB14523
Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.