ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z0tA1 - ECOD Domain | ECOD

ECOD/Domains/e5z0tA1

e5z0tA1

UID: 002163022

PDB

Range: A:123-554
PDB: 5Z0T chain A(all domains)
UniProt: Q60053 (all domains)
Gene: tvaI

Molecule: Neopullulanase 1

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5Z0T RCSB PDB: 5Z0T PDBe: 5Z0T UniProt: Q60053

Downloads

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