ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5okdJ1 - ECOD Domain | ECOD

ECOD/Domains/e5okdJ1

e5okdJ1

UID: 002163509

PDB

Range: J:2-60
PDB: 5OKD chain J(all domains)
UniProt: P00130 (all domains)
Gene: UQCR10

Molecule: Cytochrome b-c1 complex subunit 9

3D Structure

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Related Domains

Browse other domains in UCR_UQCRX_QCR9 →

Classification

AArchitectureextended segments(a.20)

XX-groupSubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)(5017)

HH-groupSubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)(5017.1)

TT-groupSubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)(5017.1.1)

FFamilyUCR_UQCRX_QCR9(5017.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
PhosphatidylethanolaminePEE
drugDrugBank DB04327

Pfam Families

PF05365UCR_UQCRX_QCR9

Cytochrome b-c1 complex subunit 9

External Links

ECOD PDB View: 5OKD RCSB PDB: 5OKD PDBe: 5OKD UniProt: P00130

Downloads

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1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE

Shown in the structure viewer. Drug annotations from DrugDomain.