ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yrsB1 - ECOD Domain | ECOD

ECOD/Domains/e5yrsB1

e5yrsB1

UID: 002163962

PDB

Range: B:1001-1099
PDB: 5YRS chain B(all domains)
UniProt: P04585 (all domains)
Gene: gag-pol

Molecule: PROTEASE

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP(1.1.1.3)

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 5YRS RCSB PDB: 5YRS PDBe: 5YRS UniProt: P04585

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