ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6eomA1 - ECOD Domain | ECOD

ECOD/Domains/e6eomA1

e6eomA1

UID: 002164023

PDB

Range: A:32-555
PDB: 6EOM chain A(all domains)
UniProt: H1XW48 (all domains)
Gene: Cabys_2252

Molecule: MutT/NUDIX family protein

3D Structure

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Related Domains

Browse other domains in DUF8614 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyDUF8614(2498.1.1.101)

Ligands

in contact, ≤ 4 Å

AlanineALA
drugDrugBank DB00160
LysineLYS
drugDrugBank DB00123
Chloride ion

Pfam Families

PF30221DUF8614

Domain of unknown function (DUF8614)

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 6EOM RCSB PDB: 6EOM PDBe: 6EOM UniProt: H1XW48

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

Zinc ionZN

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.