ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bz2B1 - ECOD Domain | ECOD

ECOD/Domains/e6bz2B1

e6bz2B1

UID: 002164911

PDB

Range: B:1-99
PDB: 6BZ2 chain B(all domains)
UniProt: P03366 (all domains)
Gene: gag-pol

Molecule: Protease

3D Structure

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Related Domains

Browse other domains in RVP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyRVP(1.1.1.3)

Ligands

in contact, ≤ 4 Å

(3S,3aR,5R,7aS,8S)-hexahydro-4H-3,5-methanofuro[2,3-b]pyran-8-yl [(2S,3R)-4-[{[2-(cyclopropylamino)-1,3-benzothiazol-6-yl]sulfonyl}(2-methylpropyl)amino]-1-(3,5-difluorophenyl)-3-hydroxybutan-2-yl]carbamate7OA
Chloride ionCL

+ 1 additive (Acetate)

Acetate

Pfam Families

Retroviral aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 6BZ2 RCSB PDB: 6BZ2 PDBe: 6BZ2 UniProt: P03366

Downloads

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DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.