ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n3mA1 - ECOD Domain | ECOD

ECOD/Domains/e5n3mA1

e5n3mA1

UID: 002165095

PDB

Range: A:11-350
PDB: 5N3M chain A(all domains)
UniProt: P25321 (all domains)
Gene: PRKACA

Molecule: cAMP-dependent protein kinase catalytic subunit alpha

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

D-arginineDAR
drugDrugBank DB04027

+ 2 additives (Dimethyl sulfoxide, (4r)-2-Methylpentane-2,4-Diol)

Dimethyl sulfoxideDMS
DrugBank DB01093

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5N3M RCSB PDB: 5N3M PDBe: 5N3M UniProt: P25321

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(4r)-2-Methylpentane-2,4-DiolMPD

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.