ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o8rB2 - ECOD Domain | ECOD

ECOD/Domains/e5o8rB2

e5o8rB2

UID: 002165191

PDB

Range: B:162-338
PDB: 5O8R chain B(all domains)
UniProt: D4I246 (all domains)
Gene: dfoA

Molecule: L-lysine 6-monooxygenase involved in desferrioxamine biosynthesis

3D Structure

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Related Domains

Browse other domains in Lys_Orn_oxgnase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyLys_Orn_oxgnase(2003.1.2.28)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Pfam Families

PF13434Lys_Orn_oxgnase

L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5O8R RCSB PDB: 5O8R PDBe: 5O8R UniProt: D4I246

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.