ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uxxA1 - ECOD Domain | ECOD

ECOD/Domains/e5uxxA1

e5uxxA1

UID: 002165446

PDB

Range: A:5-76,A:97-103
PDB: 5UXX chain A(all domains)
UniProt: A0A0H3M3R8 (all domains)
Gene: sigH

Molecule: RNA polymerase sigma factor

3D Structure

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Related Domains

Browse other domains in Sigma70_r2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSigma2 domain-like(142)

HH-groupSigma2 domain of RNA polymerase sigma factors(142.1)

TT-groupSigma2 domain of RNA polymerase sigma factors(142.1.1)

FFamilySigma70_r2(142.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04542Sigma70_r2

Sigma-70 region 2

ClanCL0123HTH

External Links

ECOD PDB View: 5UXX RCSB PDB: 5UXX PDBe: 5UXX UniProt: A0A0H3M3R8

Downloads

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