ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v4vA1 - ECOD Domain | ECOD

ECOD/Domains/e5v4vA1

e5v4vA1

UID: 002166015

PDB

Range: A:1-397
PDB: 5V4V chain A(all domains)
UniProt: P41816 (all domains)
Gene: OYE3

Molecule: NADPH dehydrogenase 3

3D Structure

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Related Domains

Browse other domains in Oxidored_FMN →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOxidored_FMN(2002.1.1.32)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
NicotinamideNCA
drugDrugBank DB02701

+ 1 additive (Glycerin)

Pfam Families

PF00724Oxidored_FMN

NADH:flavin oxidoreductase / NADH oxidase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5V4V RCSB PDB: 5V4V PDBe: 5V4V UniProt: P41816

Downloads

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GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.