ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6f23B1 - ECOD Domain | ECOD

ECOD/Domains/e6f23B1

e6f23B1

UID: 002167186

PDB

Range: B:3-156
PDB: 6F23 chain B(all domains)
UniProt: P36639 (all domains)
Gene: NUDT1

Molecule: 7,8-dihydro-8-oxoguanine triphosphatase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

4-[(2~{R})-2-phenylpyrrolidin-1-yl]-1~{H}-pyrrolo[2,3-b]pyridineC8Z

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 6F23 RCSB PDB: 6F23 PDBe: 6F23 UniProt: P36639

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.