ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v0wB1 - ECOD Domain | ECOD

ECOD/Domains/e5v0wB1

e5v0wB1

UID: 002167318

PDB

Range: B:211-410
PDB: 5V0W chain B(all domains)
UniProt: A5K1A2 (all domains)
Gene: PVX_085815

Molecule: Glycylpeptide N-tetradecanoyltransferase

3D Structure

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Related Domains

Browse other domains in NMT_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyNMT_C(213.1.1.9)

Ligands

in contact, ≤ 4 Å

Myristoyl-CoaMYA
drugDrugBank DB02180
Chloride ionCL
1-[5-[3,4-bis(fluoranyl)-2-[2-(1,3,5-trimethylpyrazol-4-yl)ethoxy]phenyl]-1-methyl-indazol-3-yl]-~{N},~{N}-dimethyl-methanamineKFK

Pfam Families

Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 5V0W RCSB PDB: 5V0W PDBe: 5V0W UniProt: A5K1A2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.