ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xioB1 - ECOD Domain | ECOD

ECOD/Domains/e5xioB1

e5xioB1

UID: 002167455

PDB

Range: B:620-719
PDB: 5XIO chain B(all domains)
UniProt: Q5CWN3 (all domains)
Gene: cgd6_4400

Molecule: Proline-tRNA synthetase class II aaRS (Ybak RNA binding domain plus tRNA synthetase)

3D Structure

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Related Domains

Browse other domains in ProRS-C_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupIF3-like(328)

HH-groupC-terminal domain of ProRS(328.2)

TT-groupC-terminal domain of ProRS(328.2.1)

FFamilyProRS-C_1(328.2.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09180ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

External Links

ECOD PDB View: 5XIO RCSB PDB: 5XIO PDBe: 5XIO UniProt: Q5CWN3

Downloads

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