ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xiqC3 - ECOD Domain | ECOD

ECOD/Domains/e5xiqC3

e5xiqC3

UID: 002167475

PDB

Range: C:720-830
PDB: 5XIQ chain C(all domains)
UniProt: S8G8I1 (all domains)
Gene: TGME49_219850

Molecule: Prolyl-tRNA synthetase (ProRS)

3D Structure

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Related Domains

Browse other domains in ProRS-C_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupIF3-like(328)

HH-groupC-terminal domain of ProRS(328.2)

TT-groupC-terminal domain of ProRS(328.2.1)

FFamilyProRS-C_1(328.2.1.1)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP
within 5 Å only
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09180ProRS-C_1

Prolyl-tRNA synthetase, C-terminal

External Links

ECOD PDB View: 5XIQ RCSB PDB: 5XIQ PDBe: 5XIQ UniProt: S8G8I1

Downloads

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