ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z2lB1 - ECOD Domain | ECOD

ECOD/Domains/e5z2lB1

e5z2lB1

UID: 002167521

PDB

Range: B:2-237
PDB: 5Z2L chain B(all domains)
UniProt: P39333 (all domains)
Gene: bdcA

Molecule: Cyclic-di-GMP-binding biofilm dispersal mediator protein

3D Structure

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Related Domains

Browse other domains in adh_short_C2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyadh_short_C2(2003.1.1.69)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13561adh_short_C2

Enoyl-(Acyl carrier protein) reductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5Z2L RCSB PDB: 5Z2L PDBe: 5Z2L UniProt: P39333

Downloads

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