ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5owfA1 - ECOD Domain | ECOD

ECOD/Domains/e5owfA1

e5owfA1

UID: 002167619

PDB

Range: A:25-111,A:212-259
PDB: 5OWF chain A(all domains)
UniProt: P02911 (all domains)
Gene: argT

Molecule: Lysine/arginine/ornithine-binding periplasmic protein

3D Structure

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Related Domains

Browse other domains in SBP_bac_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3(7523.1.1.4)

Ligands

in contact, ≤ 4 Å

L-GlutamineGLN
drugDrugBank DB00130

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

External Links

ECOD PDB View: 5OWF RCSB PDB: 5OWF PDBe: 5OWF UniProt: P02911

Downloads

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1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.