ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cn0B2 - ECOD Domain | ECOD

ECOD/Domains/e6cn0B2

e6cn0B2

UID: 002167787

PDB

Range: B:59-61,B:82-281
PDB: 6CN0 chain B(all domains)
UniProt: Q33DX5 (all domains)
Gene: rmtC

Molecule: 16S rRNA (guanine(1405)-N(7))-methyltransferase

3D Structure

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Related Domains

Browse other domains in FmrO →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyFmrO(2003.1.5.60)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Citric acid, Sulfate ion)

Citric acidCIT
DrugBank DB04272
Sulfate ionSO4

Pfam Families

Ribosomal RNA methyltransferase (FmrO)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6CN0 RCSB PDB: 6CN0 PDBe: 6CN0 UniProt: Q33DX5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.