ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cmzD3 - ECOD Domain | ECOD

ECOD/Domains/e6cmzD3

e6cmzD3

UID: 002169823

PDB

Range: D:341-460
PDB: 6CMZ chain D(all domains)
UniProt: B4EEF2 (all domains)
Gene: lpdV

Molecule: Dihydrolipoyl dehydrogenase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_dim →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2)

TT-groupFAD/NAD-linked reduatases, dimerisation (C-terminal) domain(244.2.1)

FFamilyPyr_redox_dim(244.2.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (D-Malic acid)

D-Malic acidMLT
DrugBank DB03499

Shown in the structure viewer.

Pfam Families

PF02852Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

ClanCL0608Reductase_C

External Links

ECOD PDB View: 6CMZ RCSB PDB: 6CMZ PDBe: 6CMZ UniProt: B4EEF2

Downloads

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Drug annotations from DrugDomain.