ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xm3C1 - ECOD Domain | ECOD

ECOD/Domains/e5xm3C1

e5xm3C1

UID: 002170192

PDB

Range: C:32-627
PDB: 5XM3 chain C(all domains)
UniProt: A3FJ48 (all domains)
Gene: MAMP_01209

Molecule: Glucose dehydrogenase

3D Structure

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Related Domains

Browse other domains in PQQ,PQQ_2 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyPQQ,PQQ_2(5.1.5.8)

Ligands

in contact, ≤ 4 Å

Pyrroloquinoline QuinonePQQ
drugDrugBank DB03205
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain

ClanCL0186Beta_propeller

Outer membrane protein assembly factor BamB

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5XM3 RCSB PDB: 5XM3 PDBe: 5XM3 UniProt: A3FJ48

Downloads

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