ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yyrA2 - ECOD Domain | ECOD

ECOD/Domains/e5yyrA2

e5yyrA2

UID: 002170270

PDB

Range: A:128-178
PDB: 5YYR chain A(all domains)
UniProt: P02883 (all domains)

Molecule: Preprothaumatin I

3D Structure

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Related Domains

Browse other domains in Thaumatin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLaminaripentaose-producing beta-1,3-glucanase insertion domain(3484)

HH-groupLaminaripentaose-producing beta-1,3-glucanase insertion domain(3484.1)

TT-groupLaminaripentaose-producing beta-1,3-glucanase insertion domain(3484.1.1)

FFamilyThaumatin(3484.1.1.1)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00314Thaumatin

Thaumatin family

ClanCL0872PfC-like

External Links

ECOD PDB View: 5YYR RCSB PDB: 5YYR PDBe: 5YYR UniProt: P02883

Downloads

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Drug annotations from DrugDomain.