ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5z1wB1 - ECOD Domain | ECOD

ECOD/Domains/e5z1wB1

e5z1wB1

UID: 002170275

PDB

Range: B:124-342
PDB: 5Z1W chain B(all domains)
UniProt: A2A259 (all domains)
Gene: Pkd2l1

Molecule: Polycystic kidney disease 2-like 1 protein

3D Structure

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Related Domains

Browse other domains in Polycystin_dom →

Classification

AArchitecturea+b two layers(a.11)

XX-groupPolycystin-mucolipin domain(1116)

HH-groupPolycystin-mucolipin domain(1116.1)

TT-groupPolycystin-mucolipin domain(1116.1.1)

FFamilyPolycystin_dom(1116.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20519Polycystin_dom

Polycystin domain

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5Z1W RCSB PDB: 5Z1W PDBe: 5Z1W UniProt: A2A259

Downloads

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