ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v3jE3 - ECOD Domain | ECOD

ECOD/Domains/e5v3jE3

e5v3jE3

UID: 002170659

PDB

Range: E:444-499
PDB: 5V3J chain E(all domains)
UniProt: E9PYI1 (all domains)
Gene: Znf568

Molecule: Zinc finger protein 568

3D Structure

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Related Domains

Browse other domains in zf-C2H2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2(386.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

+ 1 additive (Tromethamine)

TromethamineTRS

Pfam Families

PF00096zf-C2H2

Zinc finger, C2H2 type

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 5V3J RCSB PDB: 5V3J PDBe: 5V3J UniProt: E9PYI1

Downloads

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DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.