ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cioF5 - ECOD Domain | ECOD

ECOD/Domains/e6cioF5

e6cioF5

UID: 002170784

PDB

Range: F:2-257
PDB: 6CIO chain F(all domains)
UniProt: Q2RMD6 (all domains)
Gene: Moth_0064

Molecule: PYRUVATE-FERREDOXIN OXIDOREDUCTASE

3D Structure

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Related Domains

Browse other domains in POR_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyPOR_N(7574.1.1.4)

Ligands

in contact, ≤ 4 Å

3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-CARBOXY-1-HYDROXYETHYL)-5-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUMTDL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg

ClanCL0254THDP-binding

External Links

ECOD PDB View: 6CIO RCSB PDB: 6CIO PDBe: 6CIO UniProt: Q2RMD6

Downloads

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