ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6fi8H1 - ECOD Domain | ECOD

ECOD/Domains/e6fi8H1

e6fi8H1

UID: 002170875

PDB

Range: H:6-130
PDB: 6FI8 chain H(all domains)
UniProt: Q933Z0 (all domains)
Gene: tnpA

Molecule: Putative transposase

3D Structure

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Related Domains

Browse other domains in Y1_Tnp →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOrigin of replication-binding domains(304.55)

TT-groupTransposase IS200-like(304.55.2)

FFamilyY1_Tnp(304.55.2.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Transposase IS200 like

ClanCL0481HUH

External Links

ECOD PDB View: 6FI8 RCSB PDB: 6FI8 PDBe: 6FI8 UniProt: Q933Z0

Downloads

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