ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5oa4A1 - ECOD Domain | ECOD

ECOD/Domains/e5oa4A1

e5oa4A1

UID: 002171447

PDB

Range: A:8-295
PDB: 5OA4 chain A(all domains)
UniProt: Q5AR53 (all domains)
Gene: asqJ

Molecule: Iron/alpha-ketoglutarate-dependent dioxygenase asqJ

3D Structure

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Related Domains

Browse other domains in PhyH →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPhyH(10.12.1.25)

Ligands

in contact, ≤ 4 Å

(3S)-3-(4-methoxybenzyl)-4-methyl-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione58D
Chloride ionCL
NICKEL (II) IONNI

Pfam Families

Phytanoyl-CoA dioxygenase (PhyH)

ClanCL0029Cupin

External Links

ECOD PDB View: 5OA4 RCSB PDB: 5OA4 PDBe: 5OA4 UniProt: Q5AR53

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.