ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ojyA2 - ECOD Domain | ECOD

ECOD/Domains/e5ojyA2

e5ojyA2

UID: 002171616

PDB

Range: A:14-92
PDB: 5OJY chain A(all domains)
UniProt: A0A0D3RJT7 (all domains)
Gene: pamR2

Molecule: TetR family transcription regulator

3D Structure

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Related Domains

Browse other domains in TetR_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyTetR_N(101.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Citric acid, Glycerol)

Citric acidCIT
DrugBank DB04272
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial regulatory proteins, tetR family

ClanCL0123HTH

External Links

ECOD PDB View: 5OJY RCSB PDB: 5OJY PDBe: 5OJY UniProt: A0A0D3RJT7

Downloads

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