ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yljD1 - ECOD Domain | ECOD

ECOD/Domains/e5yljD1

e5yljD1

UID: 002171668

PDB

Range: D:1-243
PDB: 5YLJ chain D(all domains)
UniProt: P02554 (all domains)

Molecule: Tubulin beta chain

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
(E)-1-(5-methoxy-2,2-dimethyl-chromen-8-yl)-3-(4-methoxyphenyl)prop-2-en-1-one8X0
Magnesium ionMG

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5YLJ RCSB PDB: 5YLJ PDBe: 5YLJ UniProt: P02554

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.