ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6apfB1 - ECOD Domain | ECOD

ECOD/Domains/e6apfB1

e6apfB1

UID: 002172376

PDB

Range: B:1-120,B:188-281
PDB: 6APF chain B(all domains)
UniProt: Q4U443 (all domains)
Gene: dszD

Molecule: DisD protein

3D Structure

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Related Domains

Browse other domains in Acyl_transf_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupFabD/lysophospholipase-like(2007.1.19)

FFamilyAcyl_transf_1(2007.1.19.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Citric acid, Glycerin, Sulfate ion)

Citric acidCIT
DrugBank DB04272
GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

PF00698Acyl_transf_1

Acyl transferase domain

ClanCL0323Patatin

External Links

ECOD PDB View: 6APF RCSB PDB: 6APF PDBe: 6APF UniProt: Q4U443

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.