ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ud7D1 - ECOD Domain | ECOD

ECOD/Domains/e5ud7D1

e5ud7D1

UID: 002172868

PDB

Range: D:21-130
PDB: 5UD7 chain D(all domains)
UniProt: Q9NZC2 (all domains)
Gene: TREM2

Molecule: Triggering receptor expressed on myeloid cells 2

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 5UD7 RCSB PDB: 5UD7 PDBe: 5UD7 UniProt: Q9NZC2

Downloads

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