ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ftfA1 - ECOD Domain | ECOD

ECOD/Domains/e4ftfA1

e4ftfA1

UID: 000221374

RepresentativePDB

Range: A:3-111
PDB: 4FTF chain A(all domains)
UniProt: Q9KRD9 (all domains)
Gene: VC_1703

Molecule: Alternate secretin pathway subunit S (VC395_1821, VC1703)

3D Structure

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Related Domains

Browse other domains in T2SSS_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupputative secreted protein PA3611(3148)

HH-groupputative secreted protein PA3611(3148.1)

TT-groupputative secreted protein PA3611(3148.1.1)

FFamilyT2SSS_2(3148.1.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16549T2SSS_2

Type II secretion system (T2SS) pilotin, S protein

ClanCL0940AspS-like

External Links

ECOD PDB View: 4FTF RCSB PDB: 4FTF PDBe: 4FTF UniProt: Q9KRD9

Downloads

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