ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4h13C2 - ECOD Domain | ECOD

ECOD/Domains/e4h13C2

e4h13C2

UID: 000222765

PDB

Range: C:251-288
PDB: 4H13 chain C(all domains)
UniProt: P83793 (all domains)
Gene: petA

Molecule: Apocytochrome f

3D Structure

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Related Domains

Browse other domains in Apocytochr_F_C →

Classification

AArchitectureextended segments(a.20)

XX-groupCytochrome f subunit of the cytochrome b6f complex, transmembrane anchor(5024)

HH-groupCytochrome f subunit of the cytochrome b6f complex, transmembrane anchor(5024.1)

TT-groupCytochrome f subunit of the cytochrome b6f complex, transmembrane anchor(5024.1.1)

FFamilyApocytochr_F_C(5024.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755within 5 Å only
Undecyl-Beta-D-MaltopyranosideUMQ
drugDrugBank DB02686within 5 Å only

Pfam Families

PF01333Apocytochr_F_C

Apocytochrome F, C-terminal

ClanCL0105Hybrid

External Links

ECOD PDB View: 4H13 RCSB PDB: 4H13 PDBe: 4H13 UniProt: P83793

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate7PH

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

8-HYDROXY-5,7-DIMETHOXY-3-METHYL-2-TRIDECYL-4H-CHROMEN-4-ONETDS

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.