ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qfmA1 - ECOD Domain | ECOD

ECOD/Domains/e1qfmA1

e1qfmA1

UID: 000002230

RepresentativePDB

Range: A:1-430
PDB: 1QFM chain A(all domains)
UniProt: P23687 (all domains)
Gene: PREP

Molecule: PROTEIN (PROLYL OLIGOPEPTIDASE)

3D Structure

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Related Domains

Browse other domains in Peptidase_S9_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyPeptidase_S9_N(5.1.4.14)

Ligands

in contact, ≤ 4 Å

1-Hydroxy-1-Thio-GlycerolSGL
drugDrugBank DB01684
MonothioglycerolSGM

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

PF02897Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 1QFM RCSB PDB: 1QFM PDBe: 1QFM UniProt: P23687

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.