ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dodA1 - ECOD Domain | ECOD

ECOD/Domains/e4dodA1

e4dodA1

UID: 000223034

PDB

Range: A:24-475
PDB: 4DOD chain A(all domains)
UniProt: P96311 (all domains)
Gene: celA

Molecule: 1,4-beta-glucanase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_9 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_9(109.2.1.3)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 4 additives (1,4-Dioxane, Glycerin, Sulfate ion, …)

1,4-DioxaneDIO
DrugBank DB03316
Glycerin

Pfam Families

PF00759Glyco_hydro_9

Glycosyl hydrolase family 9

ClanCL00596_Hairpin

External Links

ECOD PDB View: 4DOD RCSB PDB: 4DOD PDBe: 4DOD UniProt: P96311

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.