ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hyxB1 - ECOD Domain | ECOD

ECOD/Domains/e4hyxB1

e4hyxB1

UID: 000223626

PDB

Range: B:6-239
PDB: 4HYX chain B(all domains)
UniProt: P02945 (all domains)
Gene: bop

Molecule: Bacteriorhodopsin

3D Structure

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Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

TetradecaneC14
DecaneD10
HexaneHEX
N-octane

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 4HYX RCSB PDB: 4HYX PDBe: 4HYX UniProt: P02945

Downloads

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RetinalRET

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.