ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2qyuA1 - ECOD Domain | ECOD

ECOD/Domains/e2qyuA1

e2qyuA1

UID: 000223783

RepresentativePDB

Range: A:163-336
PDB: 2QYU chain A(all domains)
UniProt: Q8ZNR3 (all domains)
Gene: sopA

Molecule: Secreted effector protein

3D Structure

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Related Domains

Browse other domains in Pentapeptide →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPentapeptide repeats(207.9)

TT-groupPentapeptide repeats(207.9.1)

FFamilyPentapeptide(207.9.1.1)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

PF00805Pentapeptide

Pentapeptide repeats (8 copies)

ClanCL0505Pentapeptide

External Links

ECOD PDB View: 2QYU RCSB PDB: 2QYU PDBe: 2QYU UniProt: Q8ZNR3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.