ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xu0A1 - ECOD Domain | ECOD

ECOD/Domains/e2xu0A1

e2xu0A1

UID: 000223808

RepresentativePDB

Range: A:12-304
PDB: 2XU0 chain A(all domains)
UniProt: B7T1P0 (all domains)
Gene: varO

Molecule: ERYTHROCYTE MEMBRANE PROTEIN 1

3D Structure

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Related Domains

Browse other domains in Duffy_binding,NTS →

Classification

AArchitecturealpha bundles(a.7)

XX-groupDuffy-binding-like domain, N-terminal subdomain(4250)

HH-groupDuffy-binding-like domain, N-terminal subdomain(4250.1)

TT-groupDuffy-binding-like domain, N-terminal subdomain(4250.1.1)

FFamilyDuffy_binding,NTS(4250.1.1.2)

Ligands

in contact, ≤ 4 Å

ProlinePRO
drugDrugBank DB00172
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF05424Duffy_binding

Duffy binding domain

ClanCL0195DBL

N-terminal segments of PfEMP1

External Links

ECOD PDB View: 2XU0 RCSB PDB: 2XU0 PDBe: 2XU0 UniProt: B7T1P0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.