ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3n71A1 - ECOD Domain | ECOD

ECOD/Domains/e3n71A1

e3n71A1

UID: 000223873

RepresentativePDB

Range: A:1-283
PDB: 3N71 chain A(all domains)
UniProt: P97443 (all domains)
Gene: Smyd1

Molecule: Histone lysine methyltransferase SmyD1

3D Structure

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Related Domains

Browse other domains in SET, zf-MYND →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET, zf-MYND(70.3.1.11)

Ligands

in contact, ≤ 4 Å

SinefunginSFG
drugDrugBank DB01910
Zinc ionZN
metal

+ 2 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid)

Pfam Families

SET domain

ClanCL0489SAF

PF01753zf-MYND

MYND finger

ClanCL0175TRASH

External Links

ECOD PDB View: 3N71 RCSB PDB: 3N71 PDBe: 3N71 UniProt: P97443

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

2-(N-morpholino)ethanesulfonic acidMES

DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.