ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iumA1 - ECOD Domain | ECOD

ECOD/Domains/e4iumA1

e4iumA1

UID: 000224084

RepresentativePDB

Range: A:261-387
PDB: 4IUM chain A(all domains)
UniProt: P19811 (all domains)
Gene: rep

Molecule: papain-like protease 2

3D Structure

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Related Domains

Browse other domains in Equine arterivirus Nsp2-type cysteine proteinase / Nsp2, transmembrane domain →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyEquine arterivirus Nsp2-type cysteine proteinase / Nsp2, transmembrane domain(219.1.1.33)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05412Peptidase_C33

Equine arterivirus Nsp2-type cysteine proteinase

ClanCL0125Peptidase_CA

PF14755Nsp2_AV

Nsp2, transmembrane domain

External Links

ECOD PDB View: 4IUM RCSB PDB: 4IUM PDBe: 4IUM UniProt: P19811

Downloads

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