ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kb0A1 - ECOD Domain | ECOD

ECOD/Domains/e1kb0A1

e1kb0A1

UID: 000002244

RepresentativePDB

Range: A:1-573
PDB: 1KB0 chain A(all domains)
UniProt: Q46444 (all domains)
Gene: qheDH

Molecule: quinohemoprotein alcohol dehydrogenase

3D Structure

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Related Domains

Browse other domains in PQQ,PQQ_2 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group8-bladed(5.1.5)

FFamilyPQQ,PQQ_2(5.1.5.8)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
Pyrroloquinoline QuinonePQQ
drugDrugBank DB03205
(S)-2-Tetrahydrofuroic acid

Pfam Families

Glucose/ethanol/alcohol dehydrogenase, beta-propeller domain

ClanCL0186Beta_propeller

Outer membrane protein assembly factor BamB

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 1KB0 RCSB PDB: 1KB0 PDBe: 1KB0 UniProt: Q46444

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03051

Calcium ionCA

metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.