ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qhqA1 - ECOD Domain | ECOD

ECOD/Domains/e3qhqA1

e3qhqA1

UID: 000225693

RepresentativePDB

Range: A:1-221
PDB: 3QHQ chain A(all domains)
UniProt: E7S4M0 (all domains)
Gene: csn2

Molecule: Sag0897 family CRISPR-associated protein

3D Structure

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Related Domains

Browse other domains in Cas_Csn2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCas_Csn2(2004.1.1.169)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09711Cas_Csn2

CRISPR-associated protein (Cas_Csn2)

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3QHQ RCSB PDB: 3QHQ PDBe: 3QHQ UniProt: E7S4M0

Downloads

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