ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1udxA1 - ECOD Domain | ECOD

ECOD/Domains/e1udxA1

e1udxA1

UID: 000002311

RepresentativePDB

Range: A:1-156
PDB: 1UDX chain A(all domains)
UniProt: Q5SHE9 (all domains)
Gene: obg

Molecule: the GTP-binding protein Obg

3D Structure

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Related Domains

Browse other domains in GTP1_OBG →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupObg GTP-binding protein N-terminal domain(710)

HH-groupObg GTP-binding protein N-terminal domain(710.1)

TT-groupObg GTP-binding protein N-terminal domain(710.1.1)

FFamilyGTP1_OBG(710.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01018GTP1_OBG

GTP1/OBG

ClanCL0762GlyR

External Links

ECOD PDB View: 1UDX RCSB PDB: 1UDX PDBe: 1UDX UniProt: Q5SHE9

Downloads

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