ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1iqkA1 - ECOD Domain | ECOD

ECOD/Domains/e1iqkA1

e1iqkA1

UID: 000023134

PDB

Range: A:16-243
PDB: 1IQK chain A(all domains)
UniProt: P00742 (all domains)
Gene: F10

Molecule: coagulation Factor Xa

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONEXMI

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 1IQK RCSB PDB: 1IQK PDBe: 1IQK UniProt: P00742

Downloads

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