ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6cbdA5 - ECOD Domain | ECOD

ECOD/Domains/e6cbdA5

e6cbdA5

UID: 002319431

PDB

Range: A:579-836
PDB: 6CBD chain A(all domains)
UniProt: Q9UKV8 (all domains)
Gene: AGO2

Molecule: Protein argonaute-2

3D Structure

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Related Domains

Browse other domains in Piwi →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPiwi(2484.1.1.26)

Ligands

in contact, ≤ 4 Å

TryptophanTRP
drugDrugBank DB00150
Magnesium ionMG
metal

+ 1 additive (Isopropyl alcohol)

Pfam Families

Piwi domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 6CBD RCSB PDB: 6CBD PDBe: 6CBD UniProt: Q9UKV8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Isopropyl alcohol

DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.