ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6cg1A1 - ECOD Domain | ECOD

ECOD/Domains/e6cg1A1

e6cg1A1

UID: 002319434

PDB

Range: A:5-354
PDB: 6CG1 chain A(all domains)
UniProt: O75164 (all domains)
Gene: KDM4A

Molecule: Lysine-specific demethylase 4A

3D Structure

Loading viewer...

Related Domains

Browse other domains in JmjC,JmjN →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC,JmjN(10.12.1.10)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal
3-{[(4-fluorophenyl)methyl]amino}pyridine-4-carboxylic acidQC1
Zinc ionZN

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

jmjN domain

ClanCL0029Cupin

External Links

ECOD PDB View: 6CG1 RCSB PDB: 6CG1 PDBe: 6CG1 UniProt: O75164

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.